Ottawa began to propose evacuations from the two regions later than some of its allies and found a low increase in the number of Canadians.
A nolized flight from Jordan took off Tuesday for Athens, with only 95 of the 265 seats reserved by Ottawa.
Consular agents are still stationed in the border countries of Iran, where Canada has no diplomatic presence, in order to help people find commercial routes to go home.
The ministry claims to be aware of the total number of 800 Canadians who have left Israel, Iran and the West Bank since the start of missile strikes between Israel and Iran on June 13.
The two countries agreed with a cease-fire, which allowed the resumption of commercial flights at Tel Aviv airport.
Ottawa indicates that its emergency surveillance and intervention center has responded to more than 6000 calls and messages from Canadians and that all people asking for help to leave received information on the available departure options.
Just under 6000 Canadians have registered with World Affairs Canada as residing in Israel on Wednesday, and 5,500 in Iran and nearly 450 in the West Bank or in the Gaza Strip.
